BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002C03SP1|AL424927
(985 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig909 746 0.0
3x_Contig702 585 e-167
>3x_Contig909
Length = 3333
Score = 746 bits (362), Expect = 0.0
Identities = 403/416 (96%), Gaps = 3/416 (0%)
Strand = Plus / Minus
Query: 565 tagccaatctttcccatgatcytgttgctcttcttcgagacaytytcggttactggcaag 624
|||| ||| |||||||||||| |||||||||||||||||| | | ||||||||||| |||
Sbjct: 3333 tagcaaatatttcccatgatcttgttgctcttcttcgagaaattttcggttactggaaag 3274
Query: 625 gtaaccttggctacagtgactgcatttcatgcactttactgtacccttaccgtcctctgg 684
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3273 gtaaccttggctacagtgactgcatgtcatgcactttactgtacccttaccgtcctctgg 3214
Query: 685 tgtttatgaaagccgttccttgcaatgtgtataaattgtaggttgtattttatgtgtgtt 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3213 tgtttatgaaagccgttccttgcaatgtgtataaattgtaggttgtattttatgtgtgtt 3154
Query: 745 tccattttgacgtttatgtcatagtatgtatatataagtgacttaagctatgaacaacgt 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3153 tccattttgacgtttatgtcatagtatgtatatataagtgacttaagctatgaacaacgt 3094
Query: 805 gtcaaccatctatataatttatacagttcaacgcctatttcttggctttgaattggtcaa 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3093 gtcaaccatctatataatttatacagttcaacgcctatttcttggctttgaattggtcaa 3034
Query: 865 actgtttatcaaagtcagtbagtgtgaatctgaaacgaacatcaccgctttccattcttt 924
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3033 actgtttatcaaagtcagttagtgtgaatctgaaacgaacatcaccgctttccattcttt 2974
Query: 925 tgaacactgtggagata-tttcctcactgattggaa-cgtttc-amccatagtttg 977
||||||||||||||||| |||||||||||||||||| |||||| | ||||||||||
Sbjct: 2973 tgaacactgtggagatattttcctcactgattggaaccgtttcaacccatagtttg 2918
>3x_Contig702
Length = 2831
Score = 585 bits (284), Expect = e-167
Identities = 351/396 (88%), Gaps = 1/396 (0%)
Strand = Plus / Minus
Query: 3 tcgttttaagtctcttgtccttattcytctccggttgccccccagactcmtcagcmccgt 62
||||||||||| |||||||||||||| ||||||||||| ||||||| || ||||| ||||
Sbjct: 399 tcgttttaagtttcttgtccttattcttctccggttgcaccccagaatcatcagcaccgt 340
Query: 63 yatagcctatmtgayccgccgacttgtcatgtctatctctggtgcgtttccgtcgtactc 122
||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tatagcctatatgatccgacgacttgtcatgtctatctctggtgcgtttccgtcgtactc 280
Query: 123 cmccatcyccmgcgtcccataamtcagcctgtmctttggmatgtatatcatcmtcmatca 182
| ||||| || ||||||||||| ||||||||| |||||| |||||||| ||| || ||||
Sbjct: 279 caccatctccagcgtcccataaatcagcctgtactttggaatgtatattatcatcaatca 220
Query: 183 gaagttccttcagcmgtctatttcgcttagmagtcgtcattcttaamtmtgcsatgactg 242
|||||||||||||| ||||||||||||||| ||||||||||||||| | ||| |||||||
Sbjct: 219 gaagttccttcagcagtctatttcgcttagaagtcgtcattcttaaatatgcgatgactg 160
Query: 243 ccacttgatgaattattatytcttctttcmatataaggyaaaccmatagagaggatagtm 302
||||||||||||||||||| ||||||||| |||||||| |||| ||||||||||||||
Sbjct: 159 ccacttgatgaattattatttcttctttcaatataaggtaaacaaatagagaggatagta 100
Query: 303 cctttmcyagttttagaagagaagaatgtctatycyaamamcmcattctca-cmagamct 361
||||| | ||||||||||||||||||||||||| | || | | |||||||| | ||| ||
Sbjct: 99 cctttactagttttagaagagaagaatgtctattctaaaaacacattctcagcaagaact 40
Query: 362 cacmaagtccgagtyatagtmaacgacactcacagc 397
||| |||||||||| ||||| ||||| ||| |||||
Sbjct: 39 cacaaagtccgagttatagtaaacgaaactaacagc 4
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.719 1.35
Gapped
Lambda K H
1.43 0.719 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4625
Number of Sequences: 1807
Number of extensions: 4625
Number of successful extensions: 102
Number of sequences better than 1.0e-20: 2
length of query: 985
length of database: 10,358,551
effective HSP length: 16
effective length of query: 969
effective length of database: 10,329,639
effective search space: 10009420191
effective search space used: 10009420191
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.9 bits)
S1: 11 (23.1 bits)
S2: 49 (101.5 bits)